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Sourcecode: python-biopython version File versions

Bio::GFF::easy::LocationJoin Class Reference

Inheritance diagram for Bio::GFF::easy::LocationJoin:

Bio::GFF::easy::Location

List of all members.


Detailed Description

>>> join = LocationJoin([LocationFromCoords(339, 564, 1), LocationFromString("complement(100..339)")])
>>> appendloc = LocationFromString("order(complement(66..99),complement(5..55))")
>>> join.append(appendloc)
>>> print join
join(complement(340..565),complement(100..339),order(complement(66..99),complement(5..55)))
>>> join2 = LocationJoin()
>>> join2.append(LocationFromString("complement(66..99)"))
>>> join2.append(LocationFromString("complement(5..55)"))
>>> print join2
join(complement(66..99),complement(5..55))

Definition at line 316 of file easy.py.


Public Member Functions

def __add__
def __init__
def __repr__
def __str__
def __sub__
def add
def bounding
def direction_and_index
def end
def findseqname
def findseqname_3prime
def findside
def five_prime
def intersection
def length
def reorient
def reverse
def start
def sublocation
def three_prime
def three_prime_range

Public Attributes

 complement
 fuzzy
 join
 seqname

Static Public Attributes

dictionary direction2index = {1: 0, -1: -1}

The documentation for this class was generated from the following file:

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