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Sourcecode: python-biopython version File versions

Bio::GenBank::_FeatureConsumer Class Reference

Inheritance diagram for Bio::GenBank::_FeatureConsumer:

Bio::GenBank::_BaseGenBankConsumer Bio::ParserSupport::AbstractConsumer

List of all members.


Detailed Description

Create a SeqRecord object with Features to return.

Attributes:
o use_fuzziness - specify whether or not to parse with fuzziness in
feature locations.
o feature_cleaner - a class that will be used to provide specialized
cleaning-up of feature values.

Definition at line 353 of file __init__.py.


Public Member Functions

def __getattr__
def __init__
def __init__
def accession
def authors
def base_count
def base_number
def comment
def consrtm
def contig_location
def data_file_division
def date
def db_source
def definition
def feature_key
def feature_qualifier_description
def feature_qualifier_name
def features_line
def gi
def journal
def keywords
def location
def locus
def medline_id
def nid
def organism
def origin_name
def pid
def pubmed_id
def record_end
def reference_bases
def reference_num
def remark
def residue_type
def segment
def sequence
def size
def source
def start_feature_table
def taxonomy
def title
def version

Public Attributes

 data

Static Public Attributes

list remove_space_keys = ["translation"]

Private Member Functions

def _add_feature
def _add_qualifier
def _get_location
def _get_position
def _set_function
def _set_location
def _set_location_info
def _set_ordering_info
def _split_reference_locations

Private Attributes

 _cur_feature
 _cur_qualifier_key
 _cur_qualifier_value
 _current_ref
 _feature_cleaner
 _seq_data
 _seq_type
 _use_fuzziness

The documentation for this class was generated from the following file:

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