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Bio::config::DBRegistry::BioSQLDB Class Reference

Inheritance diagram for Bio::config::DBRegistry::BioSQLDB:

Bio::config::DBRegistry::DBObject Bio::config::Registry::RegisterableObject

List of all members.


Detailed Description

Represent a BioSQL-style database to retrieve SeqRecord objects.

This returns a SeqRecord-like object from _get() instead of a
handle (since BioSQL is not going to give you a handle).

Definition at line 375 of file DBRegistry.py.


Public Member Functions

def __getitem__
def __init__
def __init__
def __init__
def get
def get_as
def set

Public Attributes

 abbrev
 db_host
 db_passwd
 db_port
 db_type
 db_user
 name
 namespace_db
 sql_db

Private Member Functions

def _convert_to
def _get
def _get_db_module
def _make_pickleable
def _unmake_pickleable

The documentation for this class was generated from the following file:

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