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Bio::HMM::DynamicProgramming::LogDPAlgorithms Class Reference

Inheritance diagram for Bio::HMM::DynamicProgramming::LogDPAlgorithms:

Bio::HMM::DynamicProgramming::AbstractDPAlgorithms

List of all members.


Detailed Description

Implement forward and backward algorithms using a log approach.

This uses the approach of calculating the sum of log probabilities
using a lookup table for common values.

XXX This is not implemented yet!

Definition at line 316 of file DynamicProgramming.py.


Public Member Functions

def __init__
def backward_algorithm
def forward_algorithm

The documentation for this class was generated from the following file:

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