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Bio::NeuralNetwork::Gene::Schema::Schema Class Reference

List of all members.

Detailed Description

Deal with motifs that have ambiguity characters in it.

This motif class allows specific ambiguity characters and tries to
speed up finding motifs using regular expressions.

This is likely to be a replacement for the Schema representation,
since it allows multiple ambiguity characters to be used.

Definition at line 34 of file Schema.py.

Public Member Functions

def __init__
def all_unambiguous
def encode_motif
def find_ambiguous
def find_matches
def num_ambiguous
def num_matches

Private Attributes


The documentation for this class was generated from the following file:

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