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Sourcecode: python-biopython version File versions  Download package

dictionary Bio::pairwise2::align::alignment_function::match2args [static]

Initial value:

            'x' : ([], ''),
            'm' : (['match', 'mismatch'],
"""match is the score to given to identical characters.  mismatch isthe score given to non-identical ones."""),
            'd' : (['match_dict'],
"""match_dict is a dictionary where the keys are tuples of pairs ofcharacters and the values are the scores, e.g. ("A", "C") : 2.5."""),
            'c' : (['match_fn'],
"""match_fn is a callback function that takes two characters andreturns the score between them."""),

Definition at line 115 of file pairwise2.py.

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