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Sourcecode: python-biopython version File versions

Bio::GFF::RetrieveSeqname Class Reference

Inheritance diagram for Bio::GFF::RetrieveSeqname:

Bio::GFF::GenericTools::Surrogate Bio::SeqRecord::SeqRecord

List of all members.

Detailed Description

Singleton: contain records of loaded FASTA files

>>> RetrieveSeqname._dir = 'GFF'
>>> RetrieveSeqname._diagnostics = 1
>>> sys.stderr = sys.stdout # dump diagnostics to stdout so doctest can see them
>>> record1 = RetrieveSeqname('NC_001802.fna')
Loading GFF/NC_001802.fna... Done.
>>> record1.id
>>> record2 = RetrieveSeqname('NC_001802.fna')
>>> record1.seq is record2.seq # should be same space in memory

Definition at line 90 of file __init__.py.

Public Member Functions

def __getattr__
def __init__
def __init__
def __repr__
def __str__

Public Attributes


Static Private Attributes

dictionary __records = {}
int _diagnostics = 0

The documentation for this class was generated from the following file:

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